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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1129186 chr6:42932202 C/T PEX6 chr6:42931608-42946958:- 0.59 5.55 9.88E-7 Box Plot
ACC rs11295167 chr16:50393751 GA/G CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot
ACC rs11298828 chr1:213093967 GC/G LQK1 chr1:213029947-213031480:- 0.64 5.21 3.24E-6 Box Plot
ACC rs113009209 chr19:16122835 CA/C C19orf44 chr19:16607122-16632163:+ 0.73 5.13 4.29E-6 Box Plot
ACC rs11316 chr7:73246555 C/G WBSCR27 chr7:73248920-73256865:- 0.69 5.3 2.41E-6 Box Plot
ACC rs113163599 chr1:235322820 G/A RBM34 chr1:235294498-235324772:- 0.65 5.92 2.57E-7 Box Plot
ACC rs113175928 chr8:71619842 GGTT/G XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs11331213 chr14:65395443 TA/T CHURC1 chr14:65381079-65411309:+ 0.79 5.19 3.5E-6 Box Plot
ACC rs113323158 chr8:71917302 A/ACTC XKR9 chr8:71581600-71702606:+ 0.66 6.52 2.85E-8 Box Plot
ACC rs1133328 chr3:19987539 G/T EFHB chr3:19920964-19988517:- 0.82 7.78 2.8E-10 Box Plot
ACC rs1133978 chr2:99741964 C/T TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs113413 chr22:24292264 A/G GSTT2 chr22:24322249-24326106:+ 0.51 5.81 3.9E-7 Box Plot
ACC rs11343019 chr9:98757070 TC/T C9orf130 chr9:98568372-98638259:- 0.58 5.39 1.76E-6 Box Plot
ACC rs113519464 chr6:86219212 T/TTCTG SNHG5 chr6:86370668-86388454:- 0.68 6.59 2.2E-8 Box Plot
ACC rs11354035 chr2:99729007 CT/C TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot